Peptide Design Software
Simulate 1%. Predict the rest.

Simulate a representative sample, train on it, and score the full library before the bench.

LLead AI Diagnostics workspacePlatform demo records
  1. Virus target
  2. Binding region
  3. Peptide rules
  4. AI pipeline
  5. 05Results
RUN-001 / CANDIDATE REVIEW

From a sequence to a next step.

2 shortlisted
Candidate / sequencePrototype scoreShortlist
CAND-001 / WHY IT IS HERE

HBGA pocket

Matches the selected constraints in the platform’s demo configuration.

Length10 residuesSourceRUN-001Next stepScientist review
Select a candidate. Build an example shortlist.Demo sequences and scores · not laboratory evidence
Supported workflowPeptide & Aptamer Design

Why teams come
to us for this.

Binding-molecule sequence space is too large to test or simulate — and a model score must never pass as lab proof.

  • Norovirus: 6,037 candidates simulated to screen a 603,750-peptide library
  • Classifier performance of 0.84–0.91 AUC-ROC
  • Lead docking score of −75.4 kcal/mol vs a −51.1 training-set mean
DESIGNED AROUND THE TARGET

In silico peptide screening,
from library to shortlist.

Constrain the search. Simulate a sample.
Carry the evidence through to the next experiment.

01

Target-specific library

A peptide or aptamer library built around your target and use, such as a biosensor ligand.

Select a region to explore the configuration
01 / TARGET & BINDING REGION4OP7

Choose where to look.

Norovirus GII.4
VP1 capsid P domain

02 / PEPTIDE RULESExample configuration
GGG · prefixVariable coreCY · suffix
Length 9–16 aaTop candidates 10Diversity Balanced
Focus region: HBGA pocket
An example peptide configuration from the platform’s screening flow.
02

Representative simulation

An affordable sample simulated to create real training labels.

Compare the simulated sample with model coverage
NOROVIRUS RESEARCH EXAMPLE1%

simulated to label the sample

Simulation-labelledModel-scoredEach cell ≈ 1% of the library
SIMULATION → TRAINING

Small sample.
Real simulation labels.

6,037Candidates simulated603,750Peptides in the full library
  1. Select a representative subset
  2. Simulate the selected candidates
  3. Train on the resulting labels
The orange cell represents the subset used to generate training labels.
03

Model scoring at larger scale

The model scores candidates simulation could never reach.

Explore the training evidence and scored library
MODEL / SCORING RUNPrediction
Simulation labelsTrained modelLibrary scores
Prototype candidateModel score
CAND-00196
CAND-00294
CAND-00391

Platform demo scores shown to illustrate the review interface.

REPORTED CLASSIFIER PERFORMANCE0.84–0.91 AUC-ROC

Norovirus research example · prediction is not lab proof

04

Independent-method consensus

Top candidates cross-checked by independent methods before advancing.

Select a candidate to compare the methods
INDEPENDENT-METHOD COMPARISON

Does the evidence agree?

Illustrative checks
CandidatePrimary rankingIndependent check
Example cross-check outcomes, not measured results.
CAND-003 / NEXT DECISIONCheck disagreement

Different rankings. A visible decision.

The independent check does not support the same conclusion. Keep the difference visible for a scientist to investigate.

SR
Scientific reviewExperimental confirmation still required

Built for

Research leadershipDiagnostic R&DComputational scientists

The rest of the Research & Development

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